Online Tool for Restriction Enzymes
Takara Cut-Site Navigator
Takara Cut-Site Navigator is a web tool that identifies restriction endonuclease cleavage sites in DNA sequences.
Sample Name
Sequence
Cut & Paste DNA sequence
Enter your local file
Linear
Circle
Range
-
( Blank is 1 to end. )
Enzyme
Aat II
Acc I
Acc II
Acc III
Afa I
Afl II
Alu I
Aor13H I
Aor51H I
Apa I
ApaL I
Bal I
BamH I
Ban II
BciT130 I
Bcn I
Bgl I
Bgl II
Bln I
BmeT110 I
BmgT120 I
Bpu1102 I
Bsp1286 I
Bsp1407 I
BspT104 I
BspT107 I
BssH II
Bst1107 I
BstP I
BstX I
Cfr10 I
Cla I
Cpo I
Dpn I
Dra I
Eae I
Eam1105 I
Eco52 I
Eco81 I
EcoO109 I
EcoO65 I
EcoR I
EcoR V
EcoT14 I
EcoT22 I
Fba I
Hae II
Hae III
Hap II
Hha I
Hin1 I
Hinc II
Hind III
Hinf I
Hpa I
Kpn I
Mbo I
Mfl I
Mlu I
Msp I
Mun I
Nae I
Nco I
Nde I
Nhe I
Not I
Nru I
Nsb I
PmaC I
PshA I
PshB I
Psp1406 I
Pst I
Pvu I
Pvu II
Sac I
Sac II
Sal I
Sau3A I
Sca I
Sfi I
Sma I
Smi I
SnaB I
Spe I
Sph I
Sse8387 I
Ssp I
Stu I
Taq I
Tth111 I
Van91 I
VpaK11B I
Xba I
Xho I
Xsp I
Setting Details
Cutting Type
blunt end
sticky end( 5'- )
sticky end( 3'- )
Search Methylation-
Sensitive Enzymes
CpG methylase (
5m
CG)
dam methylase (G
6m
ATC)
dcm methylase (C
5m
CWGG)
Recognition Sequence
Length
longer than
4
5
6
Frequency
Not Zero
0
1
2
3
4
5
OutPut
Enzyme List
Sequence
Cutting Image
Methylation-Sensitive Enzymes List